複数の for ループの組み合わせに問題があります。そのうちの2つを例に挙げて、組み合わせたいと思います。2 つでそれを行う方法を知っていれば、複数のループで行うこともできます。
誰かがこれをlapply関数として書く方法を知っていれば、それもいいでしょう。
require(ncdf4)
#### download files from this link to directory: (I just downloaded manually,two files are sufficient to answer the example)
#### ftp://rfdata:forceDATA@ftp.iiasa.ac.at/WFDEI/LWdown_daily_WFDEI/
setwd("C:/place_where_I_have_downloaded_my_files_from_link/")
temp = list.files(pattern="*.nc") #list imported netcdf files
list2env(
lapply(setNames(temp, make.names(gsub("*.nc$", "", temp))),
nc_open), envir = .GlobalEnv) #import all parameters lists to global environment
#### first loop - # select parameter out of netcdf files and combine into a List of 2
list_temp<-list() #create empty list before loop
for (t in temp[1:2]){
list_temp[t]<-list(data.frame(LWdown=ncvar_get(nc_open(t),"LWdown")[428,176,],xcoor=176,ycoor=428))
}
LW_bind<-do.call(rbind,list_temp)
rownames(LWdown_1to2)<-NULL
#### second loop # select parameter out of onenetcdf file per x-coordinate and combine into a List of 2
list_temp<-list() #create empty list before loop
for (x in 176:177){
list_temp[t]<-list(data.frame(LWdown=ncvar_get(nc_open(temp[1]),"LWdown")[428,x,],xcoor=x,ycoor=428))
}
LW_bind<-do.call(rbind,list_temp)
rownames(LWdown_1to2)<-NULL
結合しようとしたがうまくいかなかった方法：
#### combined loops
list_temp<-list()
for (t in temp[1:2]){for (x in 176:177){
#ncin<-list()
ncin<-nc_open(t)
list_temp[x][t]<-list(data.frame(LWdown=ncvar_get(ncin,"LWdown")[428,x,],x=x,y=428))
}}
LWdown_1to2<-do.call(rbind,list_temp)
rownames(LWdown_1to2)<-NULL
私はすでに私の問題を解決しました。下記参照。しかし、上記のように 2 つの for ループをどのように解決できるのか、まだ興味があるので、質問は未回答のままにしておきます。
これが私の解決策です：
require(arrayhelpers);require(stringr);require(plyr);require(ncdf4)
# store all files from ftp://rfdata:forceDATA@ftp.iiasa.ac.at/WFDEI/ in the following folder:
setwd("C:/folder")
temp = list.files(pattern="*.nc") #list all the file names
param<-gsub("_\\S+","",temp,perl=T) #extract parameter from file name
xcoord=seq(176,180,by=1) #The X-coordinates you are interested in
ycoord=seq(428,433,by=1) #The Y-coordinates you are interested in
list_var<-list() # make an empty list
for (t in 1:length(temp)){
temp_year<-str_sub(temp[],-9,-6) #take string number last place minus 9 till last place minus 6 to extract the year from file name
temp_month<-str_sub(temp[],-5,-4) #take string number last place minus 9 till last place minus 6 to extract the month from file name
temp_netcdf<-nc_open(temp[t])
temp_day<-rep(seq(1:length(ncvar_get(temp_netcdf),"day"))),length(xcoord)*length(ycoord)) # make a string of day numbers the same length as amount of values
dim.order<-sapply(temp_netcdf[["var"]][[param[t]]][["dim"]],function(x) x$name) # gives the name of each level of the array
start <- c(lon = 428, lat = 176, tstep = 1) # indicates the starting value of each variable
count <- c(lon = 6, lat = 5, tstep = length(ncvar_get(temp_netcdf,"day"))) # indicates how many values of each variable have to be present starting from start
tempstore<-ncvar_get(temp_netcdf, param[t], start = start[dim.order], count = count[dim.order]) # array with parameter values
df_temp<-array2df (tempstore, levels = list(lon=ycoord, lat = xcoord, day = NA), label.x = "value") # convert array to dataframe
Add_date<-sort(as.Date(paste(temp_year[t],"-",temp_month[t],"-",temp_day,sep=""),"%Y-%m-%d"),decreasing=FALSE) # make vector with the dates
list_var[t]<-list(data.frame(Add_date,df_temp,parameter=param[t])) #add dates to data frame and store in a list of all output files
### nc_close(temp_netcdf) #close nc file to prevent data loss and errors
}
All_NetCDF_var_in1df<-do.call(rbind,list_var)